CDS

Accession Number TCMCG073C13161
gbkey CDS
Protein Id XP_010537255.1
Location join(3476209..3476220,3476333..3476416,3476509..3476832,3476922..3477005,3477098..3477148,3477285..3477377,3477563..3477703,3477791..3477871,3477972..3478216,3478299..3478470,3479019..3479131,3479220..3479277,3479373..3479438,3479570..3479779,3479924..3479975,3480346..3480719,3480805..3480899,3481451..3481693,3481865..3482505,3482708..3482911,3483212..3483396)
Gene LOC104812025
GeneID 104812025
Organism Tarenaya hassleriana

Protein

Length 1175aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010538953.2
Definition PREDICTED: tetratricopeptide repeat protein SKI3 isoform X1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category A
Description Tetratricopeptide repeat
KEGG_TC -
KEGG_Module M00392        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K12600        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03018        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000184        [VIEW IN EMBL-EBI]
GO:0000288        [VIEW IN EMBL-EBI]
GO:0000291        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000956        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034427        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035327        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043928        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0055087        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070478        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATCAATCTGAAGACGACGGCGGGACGGTGTTGCAGCAGCTGGAGAAATCCGTGGAGGCGAACCCAGACGACCCTTCTCTTCGCTTCGAGCTCGGTTTGTATCTGTGGGAGAACGGCGGAGATCCAGAGAAAGCGGCGGAGTGTTTCGTGCTGTCGGTGAAGTTGAACCCGGAGAATGCGACGGCGTTCAAGTATCTGGGCCATTACTACTCACGAGTGGCGCTTGATCATCTCCGAGCTGCTAAGTGTTATCAGAGATCTGTCTCGCTGAACCCTAACGATTCCGATGCCGGAGAAGCTCTCTGCGATTTGTTTGACAGAGAGGGCAAGCTGAGCTTGGAACTCGCGGTTTGCCGCGATGCTTCTGAGAAATCTCCTAAAGCTTTCTGGGCATTTGCCAGATTGGGTTACATTCAGCTTCATCAGAAGAAGTGGTCTGAAGCTGTTCAGAGCCTTCAGCATGCAATTCGAGGTTATCCTACCGTTCCTGACTTGTGGGAAGCTCTGGGTGTTGCTTACCAAAGACTTGGAATGTTTACGGCTGCTATCAAGGCATACAGCCGTGCCATAGAACTAGATGAGACCAGAGTTTTTGCGCTAGTTGAGAGTGCAAACATCTTTTTGATGCTTGGTTCATATAGAAAGGGTGTGGAGCAGTTTGAGCAGGCGCTGAAGATTTTGCCTAAGAACTCATCTGTACTATATGGTCTTGCTTCTGGACTGCTTAGTTGGTCAAAAGAATGTGTAAATTTGGGCGCATTTAGATGGGCAGCTTCATTATTGGAGGATGCTCGTAAAGTTGCAAAAGCTAGTAGTGAGTTAGCCAGCAACATGTCTTCTATATGGAAATTGCATGGTGATATTCAGCTTACGTATGCGAGATGCTTTCCATGGTCTGCGGAAACTGAAATCTCGGAAGTTGATTCAAAGAGTTTTAATGATTCAGTTCATGCTTGGAGAAGTACTTGCTCCTCAGCTGCTTTGTCTGCGAGAGCTTCTTACCAACGGGCTCTGCACTTAGCCCCTTGGCAAGCTAATATTTATACCGACATAGCCATAGCTTCAGATCTCATTTCGCCTTTAGGAGAGGACTGCGAAAGCTCAATTTCTTGGCAGCTTCAAGAGAAAATGGCTTTGGGAGCTTTGTTACTGGAGTGTGACAACTCTGAGTTCTGGGTTGCGTTGGGTTGTCTATCTCGTCATAGGGCTTTGAGATTACATGCTTTGATTCGGGGATTGCAATTAGATGTATCTCTTGCCATTGCTTGGGCATACATGGGCCAGCTTTTCAGGCAGACAGATGAAATGAAATTGGCGAAACAGGCTTTTGATTGTGCCAGAAGCATAGATCCTACACTTGCGTTACCATGGGCAGGCTCAGCTGATGTGTATGCTAGGGCATCAATAGTCGATGAGGCTTTTGAGAGCTGCTTACGAGCTGCACAAATATCACCCATTGCAGAGTTCCAAATTGGTCTGGCATGGCTAGCTTTGTTACATGGTACTCTTTCATCTCCACAGGTTTTTGCTTGCATTGAGCAGGCAGTGCAGCATGCTCCTTATTCCGAACCTCTTAATCTTCACGGCCTAGTCTGTGAGGCAAGACAGAACTATCAAACCGCTGTTACTTCCTACAGGCTGGCACGTGCTGCCTTAACGTTTTATCCAGCCAATTCTTTAAAATCTCATGATGGGGAAATATCTATTAACTTAGCCAGATCACTTAGCAAGGCAGGAAATTTTAGAGATTCAGTGAAGGAATGTGCAGATTTGAAGTTAAAAGGAATGCTTGACGACAAGGGCTTGCAAATATATGCTTTCTCTCTGTGGAAGATTGGTGAAAATGATTTGGCTCTCTTGGTGGTTAGGGATCTGGCTGGCAGAATTTCTACCATGGAAAAAACTTCAATAGCGTTCTCAGTCAGCTTCATTTGTAGGCTGCTTTATTCTGTGTCGGGTTTAGATTCTGCTATCACCAGCATCCAGAAGATGCCAAAAGATTTCTTCCAGAGTTCGAAAATTAGCTTTATTGTATCGGCAATCCATTCTCTTGATCAGAGTGATAGGTTGCAATCGATTGTTTCAAGCACGCGTAACTATATAACAATGCACGAAGAGATCATTGCAATGCACTACTTGATAGCACTCGGCAAATTGCTGAAAACTGGTGCCGGAGATTCCCTTGGATTTGATAAGGGGGTTGCTCACCTGAGAAAAGCTCTTCATATGTATCCTCATAGTAATTTGTTAAGGAAGCTGCTAGGTTATCTTTTGTTAGCTGGTGAAGAAATGAATGATGCCTGCACCGCTAGTAGATGCAGCATCATAAATGTCTCTGAATGTACAAATAAAGATGATCTAAAATCCGCATTGGATGTCCTTGGAGGAGGGGCAGTGGCCTGCAATGTTATCGGTAATACAGCTCCAAGGTTCTCCTTTCCGACTTGCCATTGCCAGTGTCTGAATGCTCCTATTGTTCCTGTAGAACTGCAAAGATTTTTGCATCAAGAACCTTGGAACTATGGTACAAGATACTTGCTCATCCTAAACCTTATGCAGAAAGCACGCGAGCAGAGATTTCCTCGAGGGCTCTGTGGTGTTATTGAACGGCTGATCTCTGTGGCACTGTCCGATGAGATATATTCTGAGGAAGGCACCTCTTACGGATATCAAAAGTTACAGCTTCTGCTTTGTGCTTCTGAGATCAGTTTGAAAACTAGAAATATAGTTGCCTCCATCAGCCATGCTCAAAAGGCTTCTTCCCTTCCCCTTCCCGATAGCTACCTGTTTTACGGACATTTGCAACTATGCCGTGCTTATGCAGCTGAGGGTAACACCAGAAACCTGCAAGAAGAATATGAATCATGTTTGAAGCTCAAGACCGACTGTAATATCAGTTGGATATGCTTGAAGCTCATAGCAGCTCAATTCGATCTGCAAAATGATTCAAGTATCCTGGAGCTAAGCCTACAAGAATGCTCAAAGGAGAAGAACTTGCAGAAAGAGTGGATGGCATTATACAATCTTGGTCTTGGCTTAGTTTGTATCCGGAAACGGGACTTTTTCTCAGCAGAGGAGTTCCTTGCACAAGCTTGTTCATTGGCTAAGTCAGAGAGCTGTGTACTTCTCTGTCATGGTGTTGTCTGCATGGAGCTGGCAAGGCAGACTAATGACTCGAAGTTCTTGTCAATGGCTGTGAAGAGCCTTGGCAAGGCACAAGCGAGTTCACTAGTGCCCTTGCCTATTGTCTACTCGTTGTTGGCTCAAGCACAAGGAAGTCTTGGTTCTAAAGAGAAATGGGAGAAGAACCTCCGTCTCGAATGGTTCTCTTGGCCACCAGAGATGAGACCTGCAGAGCTCTTCTTCCAGATGCATATACTCGCAAGGCAAGCACAAGGGCGACGTCCCGAGACTGGAACAGGCGTGGAGAATTTCCAAAGTACCGAGAAATGGGTGCTTCGGGCTATTCACACAAACCCTTCTTGTCAAAGATACTGGAGTGTTTTGTCTAAGCTTATACAATGA
Protein:  
MNQSEDDGGTVLQQLEKSVEANPDDPSLRFELGLYLWENGGDPEKAAECFVLSVKLNPENATAFKYLGHYYSRVALDHLRAAKCYQRSVSLNPNDSDAGEALCDLFDREGKLSLELAVCRDASEKSPKAFWAFARLGYIQLHQKKWSEAVQSLQHAIRGYPTVPDLWEALGVAYQRLGMFTAAIKAYSRAIELDETRVFALVESANIFLMLGSYRKGVEQFEQALKILPKNSSVLYGLASGLLSWSKECVNLGAFRWAASLLEDARKVAKASSELASNMSSIWKLHGDIQLTYARCFPWSAETEISEVDSKSFNDSVHAWRSTCSSAALSARASYQRALHLAPWQANIYTDIAIASDLISPLGEDCESSISWQLQEKMALGALLLECDNSEFWVALGCLSRHRALRLHALIRGLQLDVSLAIAWAYMGQLFRQTDEMKLAKQAFDCARSIDPTLALPWAGSADVYARASIVDEAFESCLRAAQISPIAEFQIGLAWLALLHGTLSSPQVFACIEQAVQHAPYSEPLNLHGLVCEARQNYQTAVTSYRLARAALTFYPANSLKSHDGEISINLARSLSKAGNFRDSVKECADLKLKGMLDDKGLQIYAFSLWKIGENDLALLVVRDLAGRISTMEKTSIAFSVSFICRLLYSVSGLDSAITSIQKMPKDFFQSSKISFIVSAIHSLDQSDRLQSIVSSTRNYITMHEEIIAMHYLIALGKLLKTGAGDSLGFDKGVAHLRKALHMYPHSNLLRKLLGYLLLAGEEMNDACTASRCSIINVSECTNKDDLKSALDVLGGGAVACNVIGNTAPRFSFPTCHCQCLNAPIVPVELQRFLHQEPWNYGTRYLLILNLMQKAREQRFPRGLCGVIERLISVALSDEIYSEEGTSYGYQKLQLLLCASEISLKTRNIVASISHAQKASSLPLPDSYLFYGHLQLCRAYAAEGNTRNLQEEYESCLKLKTDCNISWICLKLIAAQFDLQNDSSILELSLQECSKEKNLQKEWMALYNLGLGLVCIRKRDFFSAEEFLAQACSLAKSESCVLLCHGVVCMELARQTNDSKFLSMAVKSLGKAQASSLVPLPIVYSLLAQAQGSLGSKEKWEKNLRLEWFSWPPEMRPAELFFQMHILARQAQGRRPETGTGVENFQSTEKWVLRAIHTNPSCQRYWSVLSKLIQ